| Offensive Starters | | | | | |
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| QB | Joe Montana*+ | 33 | 10 | 13 | 271 for 386, 3,521 yards, 26 td, 8 int, & 49 rushes for 227 yards and 3 td | |
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| RB | Roger Craig* | 29 | 6 | 16 | 271 rushes for 1,054 yards, 6 td, & 49 catches for 473 yards and 1 td | |
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| FB | Tom Rathman | 27 | 3 | 16 | 79 rushes for 305 yards, 1 td, & 73 catches for 616 yards and 1 td | |
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| WR | Jerry Rice*+ | 27 | 4 | 16 | 82 catches for 1,483 yards, 17 td, & 5 rushes for 33 yards and 0 td | |
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| WR | John Taylor* | 27 | 2 | 15 | 60 catches for 1,077 yards, 10 td, & 1 rush for 6 yards and 0 td | |
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| TE | Brent Jones | 26 | 2 | 16 | 40 catches for 500 yards, 4 td | |
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| LT | Bubba Paris | 29 | 6 | 16 | 1 fumble recovered | |
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| LG | Guy McIntyre* | 28 | 5 | 13 | | |
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| C | Jesse Sapolu | 28 | 6 | 16 | | |
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| RG | Bruce Collie | 27 | 4 | 15 | | |
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| RT | Harris Barton | 25 | 2 | 16 | | |
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| Defensive Starters | | | | | |
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| LDE | Pierce Holt | 27 | 1 | 11 | 10.5 sacks, 0 interceptions, 1 fumble recovered | |
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| NT | Michael Carter | 29 | 5 | 8 | | |
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| RDE | Kevin Fagan | 26 | 2 | 15 | 7.0 sacks, 0 interceptions, 2 fumbles recovered | |
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| LOLB | Charles Haley | 25 | 3 | 16 | 10.5 sacks, 0 interceptions, 1 fumble recovered | |
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| LILB | Matt Millen | 31 | 9 | 9 | 0.0 sacks, 1 interception, 3 fumbles recovered | |
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| RILB | Mike Walter | 29 | 6 | 16 | 1.0 sacks, 0 interceptions, 1 fumble recovered | |
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| ROLB | Keena Turner | 31 | 9 | 12 | 0.0 sacks, 1 interception, 0 fumbles recovered | |
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| LCB | Darryl Pollard | 25 | 2 | 14 | 0.0 sacks, 1 interception, 0 fumbles recovered | |
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| RCB | Don Griffin | 25 | 3 | 16 | 0.0 sacks, 2 interceptions, 1 fumble recovered | |
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| SS | Chet Brooks | 23 | 1 | 15 | 1.0 sacks, 3 interceptions, 1 fumble recovered | |
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| FS | Ronnie Lott*+ | 30 | 8 | 11 | 0.0 sacks, 5 interceptions, 0 fumbles recovered | |
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Roster